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1

Corrigendum: A Larger Chocolate Chip—Development of a 15K Theobroma cacao L. SNP Array to Create High-Density Linkage Maps

Livingstone III, Donald, Stack, Conrad, Mustiga, Guiliana M., Rodezno, Dayana C., Suarez, Carmen, Amores, Freddy, Feltus, Frank A., Mockaitis, Keithanne, Cornejo, Omar E., Motamayor, Juan C.

Journal:

Frontiers in Plant Science

Year:

2018

Language:

english

File:

PDF, 133 KB

english, 2018

2

Los arbitristas agraristas de Castilla en el siglo XVII. Algunas perspectivas sobre el campesinado

GÃ³mez-Cornejo Aguado, Omar

Journal:

Iberian Journal of the History of Economic Thought

Year:

2018

File:

PDF, 306 KB

2018

3

The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color

Motamayor, Juan C, Mockaitis, Keithanne, Schmutz, Jeremy, Haiminen, Niina, III, Donald, Cornejo, Omar, Findley, Seth D, Zheng, Ping, Utro, Filippo, Royaert, Stefan, Saski, Christopher, Jenkins, Jerry,

Journal:

Year:

2013

Language:

english

File:

PDF, 10.04 MB

english, 2013

4

Increased maize growth and P uptake promoted by arbuscular mycorrhizal fungi coincide with higher foliar herbivory and larval biomass of the Fall Armyworm Spodoptera frugiperda

Real-Santillán, Raúl Omar, del-Val, Ek, Cruz-Ortega, Rocío, Contreras-Cornejo, Hexon Ángel, González-Esquivel, Carlos Ernesto, Larsen, John

Journal:

Year:

2019

Language:

english

File:

PDF, 712 KB

english, 2019

5

Geographic Differentiation and Population Genetic Structure of Moniliophthora roreri in the Principal Cocoa Production Areas in Colombia

Jaimes, Yeirme Y., Gonzalez, Carolina, Rojas, Jairo, Cornejo, Omar E., Mideros, Maria F., Restrepo, Silvia, Cilas, Christian, Furtado, E. L.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

6

Genetic differentiation and intrinsic genomic features explain variation in recombination hotspots among cocoa tree populations

Schwarzkopf, Enrique J., Motamayor, Juan C., Cornejo, Omar E.

Journal:

Year:

2020

File:

PDF, 1.61 MB

2020

7

Pherotype Polymorphism in Streptococcus pneumoniae Has No Obvious Effects on Population Structure and Recombination

Miller, Eric L., Evans, Benjamin A., Cornejo, Omar E., Roberts, Ian S., Rozen, Daniel E.

Journal:

Genome Biology and Evolution

Year:

2017

Language:

english

File:

PDF, 1.21 MB

english, 2017

8

Cellular HIV reservoir replenishment is not affected by blip or intermittent viremia episodes during darunavir/ritonavir monotherapy

Torres-Cornejo, Almudena, BenMarzouk-Hidalgo, Omar J., Gutiérrez-Valencia, Alicia, Pérez-Romero, Pilar, Martín-Peña, Reyes, Ruiz-Valderas, Rosa, Viciana, Pompeyo, Lopez-Cortes, Luis F.

Journal:

Year:

2014

Language:

english

File:

PDF, 589 KB

english, 2014

9

Mathematical description of bikaverin production in a fluidized bed bioreactor

Ma. del Carmen Chávez-Parga, Omar González-Ortega, Guadalupe Sánchez-Cornejo, Ma. de la Luz X. Negrete-Rodríguez, Guillermo González-Alatorre, Eleazar M. Escamilla-Silva

Journal:

World Journal of Microbiology and Biotechnology

Year:

2005

Language:

english

File:

PDF, 284 KB

english, 2005

10

Splice variants of the human ZC3H14 gene generate multiple isoforms of a zinc finger polyadenosine RNA binding protein

Sara W. Leung, Luciano H. Apponi, Omar E. Cornejo, Chad M. Kitchen, Sandro R. Valentini, Grace K. Pavlath, Christine M. Dunham, Anita H. Corbett

Journal:

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

11

Telaprevir and Ribavirin Interaction: Higher Ribavirin Levels Are Not Only Due to Renal Dysfunction during Triple Therapy

Gutierrez-Valencia, Alicia, Ruiz-Valderas, Rosa, Ben-Marzouk-Hidalgo, Omar J., Torres-Cornejo, Almudena, Espinosa, Nuria, Castillo-Ferrando, Juan R., Viciana, Pompeyo, Lopez-Cortes, Luis F.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2015

Language:

english

File:

PDF, 808 KB

english, 2015

12

[Society of Petroleum Engineers SPE Heavy Oil Conference-Canada - Calgary, Alberta, Canada (2013-06-11)] SPE Heavy Oil Conference-Canada - Full-Field Simulation Supports Reservoir Management Decisions in a Giant Carbonate Complex

Perez-Martinez, Ernesto, Rojas-Figueroa, Romeo Antonio, Carreras, Patricia Elva, Sizer, James P, Segura Cornejo, Victor Omar

Language:

english

File:

PDF, 1.64 MB

english

13

Secretome Characterization and Correlation Analysis Reveal Putative Pathogenicity Mechanisms and Identify Candidate Avirulence Genes in the Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici

Xia, Chongjing, Wang, Meinan, Cornejo, Omar E., Jiwan, Derick A., See, Deven R., Chen, Xianming

Journal:

Frontiers in Microbiology

Year:

2017

Language:

english

File:

PDF, 3.57 MB

english, 2017

14

Insights from transcriptome profiling on the non-photosynthetic and stomatal signaling response of maize carbonic anhydrase mutants to low CO2

Kolbe, Allison R., Studer, Anthony J., Cornejo, Omar E., Cousins, Asaph B.

Journal:

Year:

2019

Language:

english

File:

PDF, 1.68 MB

english, 2019

15

Fiebre amarilla y disfunción multiorgánica. Reporte de tres casos

Zegarra, Jaime, Meza, Mónica, Cornejo, Carla, Porras, Willy, Díaz, Alfredo, Heredia, Omar, Rojas, Wilson, Granados, Luis, Campos, Eva, Cosme, Samuel, Mayma, Pedro, Delgado, Marco, Canchos, Ivan, Casti

Journal:

Revista Medica Herediana

Year:

2017

File:

PDF, 600 KB

2017

16

On the Diversity of Malaria Parasites in African Apes and the Origin of Plasmodium falciparum from Bonobos

Krief, Sabrina, Escalante, Ananias A., Pacheco, M. Andreina, Mugisha, Lawrence, André, Claudine, Halbwax, Michel, Fischer, Anne, Krief, Jean-Michel, Kasenene, John M., Crandfield, Mike, Cornejo, Omar

Journal:

Year:

2010

Language:

english

File:

PDF, 683 KB

english, 2010

17

Environment and pathogens shape local and regional adaptations to climate change in the chocolate tree, Theobroma cacao L

Nelson, Joel T., Motamayor, Juan C., Cornejo, Omar E.

Journal:

Molecular Ecology

Year:

2020

File:

PDF, 27.92 MB

2020

18

Oscillations in Continuous Culture Populations of Streptococcus pneumoniae: Population Dynamics and the Evolution of Clonal Suicide

Omar E. Cornejo, Daniel E. Rozen, Robert M. May and Bruce R. Levin

Journal:

Proceedings Biological Sciences

Year:

2009

Language:

english

File:

PDF, 1.69 MB

english, 2009

19

The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

Pepperell, Caitlin S., Casto, Amanda M., Kitchen, Andrew, Granka, Julie M., Cornejo, Omar E., Holmes, Eddie C., Birren, Bruce, Galagan, James, Feldman, Marcus W., Sassetti, Christopher M.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.22 MB

english, 2013

20

The Population and Evolutionary Dynamics of Homologous Gene Recombination in Bacteria

Levin, Bruce R., Cornejo, Omar E., Guttman, David S.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.40 MB

english, 2009

21

Higher Activation in CD4 + T Cells But Similar Viral Control Among HIV/Hepatitis C Virus-Coinfected Patients on a Simplification Monotherapy

BenMarzouk-Hidalgo, Omar J., Torres-Cornejo, Almudena, Gutierrez-Valencia, Alicia, Ruiz-Valderas, Rosa, Viciana, Pompeyo, López-Cortés, Luis F.

Journal:

AIDS Research and Human Retroviruses

Year:

2016

Language:

english

File:

PDF, 393 KB

english, 2016

22

iXora: exact haplotype inferencing and trait association

Filippo Utro, Niina Haiminen, Donald Livingstone III, Omar E Cornejo…

Journal:

Year:

2013

Language:

english

File:

PDF, 843 KB

english, 2013

23

Differential Effects of Viremia and Microbial Translocation on Immune Activation in HIV-Infected Patients Throughout Ritonavir-Boosted Darunavir Monotherapy

BenMarzouk-Hidalgo, Omar J., Torres-Cornejo, Almudena, Gutiérrez-Valencia, Alicia, Ruiz-Valderas, Rosa, Viciana, Pompeyo, López-Cortés, Luis F.

Journal:

Medicine (Medicine Publishing Company Ltd)

Year:

2015

Language:

english

File:

PDF, 164 KB

english, 2015

24

Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process

Cornejo, Omar E., Yee, Muh-Ching, Dominguez, Victor, Andrews, Mary, Sockell, Alexandra, Strandberg, Erika, Livingstone, Donald, Stack, Conrad, Romero, Alberto, Umaharan, Pathmanathan, Royaert, Stefan,

Journal:

Communications Biology

Year:

2018

Language:

english

File:

PDF, 2.06 MB

english, 2018

25

Correction: Eco-Label Conveys Reliable Information on Fish Stock Health to Seafood Consumers

Gutiérrez, Nicolás L., Valencia, Sarah R., Branch, Trevor A., Agnew, David J., Baum, Julia K., Bianchi, Patricia L., Cornejo-Donoso, Jorge, Costello, Christopher, Defeo, Omar, Essington, Timothy E., H

Journal:

Year:

2019

Language:

english

File:

PDF, 256 KB

english, 2019

26

Tripolar chromosome segregation drives the association between maternal genotype at variants spanning PLK4 and aneuploidy in human preimplantation embryos

McCoy, Rajiv C, Newnham, Louise J, Ottolini, Christian S, Hoffmann, Eva R, Chatzimeletiou, Katerina, Cornejo, Omar E, Zhan, Qiansheng, Zaninovic, Nikica, Rosenwaks, Zev, Petrov, Dmitri A, Demko, Zacha

Journal:

Human Molecular Genetics

Year:

2018

Language:

english

File:

PDF, 1.45 MB

english, 2018

27

A Larger Chocolate Chip—Development of a 15K Theobroma cacao L. SNP Array to Create High-Density Linkage Maps

Livingstone, Donald, Stack, Conrad, Mustiga, Guiliana M., Rodezno, Dayana C., Suarez, Carmen, Amores, Freddy, Feltus, Frank A., Mockaitis, Keithanne, Cornejo, Omar E., Motamayor, Juan C.

Journal:

Frontiers in Plant Science

Year:

2017

Language:

english

File:

PDF, 3.21 MB

english, 2017

28

Assessing the effect of natural selection in malaria parasites

Ananias A Escalante, Omar E Cornejo, Ascanio Rojas, Venkatachalam Udhayakumar, Altaf A Lal

Journal:

Trends in Parasitology

Year:

2004

Language:

english

File:

PDF, 153 KB

english, 2004

29

HIV-1 p24 and CD4 + T cell count during boosted protease-inhibitor monotherapy in HIV-infected patients

Benmarzouk-Hidalgo, Omar Jesus, Torres-Cornejo, Almudena, Gutierrez-Valencia, Alicia, Viciana, Pompeyo, López-Cortés, Luis Fernando

Journal:

Enfermedades Infecciosas y Microbiología Clínica

Year:

2017

File:

PDF, 392 KB

2017

30

Genome-wide association study (GWAS) for morphological and yield-related traits in an oil palm hybrid (Elaeis oleifera x Elaeis guineensis) population

Osorio-Guarín, Jaime A., Garzón-Martínez, Gina A., Delgadillo-Duran, Paola, Bastidas, Silvio, Moreno, Leidy P., Enciso-Rodríguez, Felix E., Cornejo, Omar E., Barrero, Luz Stella

Journal:

BMC Plant Biology

Year:

2019

File:

PDF, 2.12 MB

2019

31

Genome sequence resources for the wheat stripe rust pathogen ( Puccinia striiformis f. sp. tritici ) and the barley stripe rust pathogen ( Puccinia striiformis f. sp. hordei )

Xia, Chongjing, Wang, Meinan, Yin, Chuntao, Cornejo, Omar E., Hulbert, Scot, Chen, Xianming

Journal:

Molecular Plant-Microbe Interactions

Year:

2018

Language:

english

File:

PDF, 123 KB

english, 2018

32

ARG-based genome-wide analysis of cacao cultivars

Filippo Utro, Omar Eduardo Cornejo, Donald Livingstone…

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.13 MB

english, 2012

33

Focusing the diversity of Gardnerella vaginalis through the lens of ecotypes

Cornejo, Omar E., Hickey, Roxana J., Suzuki, Haruo, Forney, Larry J.

Journal:

Evolutionary Applications

Year:

2017

Language:

english

File:

PDF, 995 KB

english, 2017

34

The origin and age of Plasmodium vivax

Omar E. Cornejo, Ananias A. Escalante

Journal:

Trends in Parasitology

Year:

2006

Language:

english

File:

PDF, 281 KB

english, 2006

35

GBStools: A Statistical Method for Estimating Allelic Dropout in Reduced Representation Sequencing Data

Cooke, Thomas F., Yee, Muh-Ching, Muzzio, Marina, Sockell, Alexandra, Bell, Ryan, Cornejo, Omar E., Kelley, Joanna L., Bailliet, Graciela, Bravi, Claudio M., Bustamante, Carlos D., Kenny, Eimear E., C

Journal:

Year:

2016

Language:

english

File:

PDF, 1.47 MB

english, 2016

36

Ancestry informative alleles captured with reduced representation library sequencing in Theobroma cacao

Osorio-Guarín, Jaime A., Quackenbush, Corey R., Cornejo, Omar E., Feltus, Frank Alexander

Journal:

Year:

2018

Language:

english

File:

PDF, 1.43 MB

english, 2018

37

Timing the origin of human malarias: the lemur puzzle

M Andreína Pacheco, Fabia U Battistuzzi, Randall E Junge, Omar E Cornejo, Cathy V Williams, Irene Landau, Lydia Rabetafika, Georges Snounou, Lisa Jones-Engel, Ananias A Escalante

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 725 KB

english, 2011

38

Does Once-Daily Raltegravir Have Any Role in the Antiretroviral Treatment?

Gutierrez-Valencia, Alicia, Chacón-Mora, Natalia, Ruiz-Valderas, Rosa, Ben-Marzouk-Hidalgo, Omar J., Torres-Cornejo, Almudena, Viciana, Pompeyo, Lopez-Cortes, Luis F.

Journal:

Medicine (Medicine Publishing Company Ltd)

Year:

2015

Language:

english

File:

PDF, 241 KB

english, 2015

39

Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear

Jansen, Heiko T., Trojahn, Shawn, Saxton, Michael W., Quackenbush, Corey R., Evans Hutzenbiler, Brandon D., Nelson, O. Lynne, Cornejo, Omar E., Robbins, Charles T., Kelley, Joanna L.

Journal:

Communications Biology

Year:

2019

Language:

english

File:

PDF, 2.05 MB

english, 2019

40

Author Correction: Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear

Jansen, Heiko T., Trojahn, Shawn, Saxton, Michael W., Quackenbush, Corey R., Evans Hutzenbiler, Brandon D., Nelson, O. Lynne, Cornejo, Omar E., Robbins, Charles T., Kelley, Joanna L.

Journal:

Communications Biology

Year:

2020

File:

PDF, 370 KB

2020

41

HIV-1 p24 and CD4+ T cell count during boosted protease-inhibitor monotherapy in HIV-infected patients

Benmarzouk-Hidalgo, Omar Jesus, Torres-Cornejo, Almudena, Gutierrez-Valencia, Alicia, Viciana, Pompeyo, López-Cortés, Luis Fernando

Journal:

Enfermedades Infecciosas y Microbiología Clínica

Year:

2016

File:

PDF, 713 KB

2016

42

Darunavir Cmin and ritonavir-boosted darunavir monotherapy outcome in HIV-infected patients

Gutierrez-Valencia, Alicia, Torres-Cornejo, Almudena, BenMarzouk-Hidalgo, Omar J, Ruiz-Valderas, Rosa, Lluch, Amparo, Viciana, Pompeyo, López-Cortés, Luis F

Journal:

Antiviral Therapy

Year:

2014

Language:

english

File:

PDF, 130 KB

english, 2014

43

ASTEROID stereotest v1.0: lower stereo thresholds using smaller, denser and faster dots

Read, Jenny C A, Wong, Zhen Yi, Yek, Xinye, Wong, Ying Xin, Bachtoula, Omar, LlamasâCornejo, Ichasus, SerranoâPedraza, Ignacio

Journal:

Ophthalmic and Physiological Optics

Year:

2020

File:

PDF, 4.33 MB

2020

44

Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)

Xia, Chongjing, Wang, Meinan, Yin, Chuntao, Cornejo, Omar E., Hulbert, Scot H., Chen, Xianming

Journal:

Year:

2018

Language:

english

File:

PDF, 2.02 MB

english, 2018

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